General information | |
Accession | Ca_00040 |
Type | TCP |
Name | transcription factor tcp8-like |
Chromosome | Ca1 |
Strand | ( - ) |
Location on chromosome | 388921-390483 |
Download Fasta | |
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Gene Sequence (CDS) | |
Gene Length | 1563 bp |
Tools Blast
| ATGGAACTATCAGATTTGCAAAACAACAAGCAGAAGAGAGGCACCCACCAACAACAACAACAAGAATCATCTTCTTCTCCTTCAAATTCTCATTCTCATTCTCATTCTCATTCTCATCAACAACACCTTGTGGTCCCTTTTGATGGAAGACCACCCCCTTTCATTATGGGCTCCATCTCCATCCAACAACCTTCTTCAAACTCTTCTTCTTCTTCTTCCTCCAATTCTTCATCTTCTGCCATTGACGCTTCTCTCGCCATCGCCACCAGATCTGAACCTCCACTCCTCAATAACACAAATAACCAATTATCCTCCTCCTCTCCCGCCGTCACCACCGTCGCCAATCCTCCTAAACGATCCACCAAAGACAGACACACCAAAGTCGACGGCCGCGGCCGTAGAATTCGAATGCCGGCGACATGTGCTGCCAGGGTTTTTCAGTTGACCAGAGAATTAGGCCACAAATCCGACGGCGAAACAATCGAGTGGCTTCTCCAGCAAGCAGAACCAGCGATCATCGCCGCCACTGGCACCGGAACGATCCCAGCTAATTTCTCCACTCTGAACGTCTCACTCAGAAGCAGTGGCTCCACGCTGTCGGCTCCGCCGTCGAAATCGGCTCCTCACAGTTTTCACGGCGCGCTTGCACTGACTCGTCATCCTTACGAGGAAGCCGCGTACCAACACGCGCCTCTTCTAGGGTTTCATCAACACCACCAACAACTGATGAGTGCTGATCAAATCGGTGAAGCTTTAAATCCAAACGAGAATTACATGAGGAAACGTTATAGAGAAGATCTTTTCAAAGACGATAATAACAACAACGAAAGTGGTGGTGATGGTTCTTCTTCTTCTCCAAAAGCTTTCAAAACAAATCATCAACAACAAGATACTATGGGTGAAGGTGAAGGTGGAGGCGGCGGCGGCGGTGGTGGTGGTAGTGGAGCTTCTTCTTCATCTTCTTCTAATAGTTCAATTTCTGGACTTCTTCGACCGTCGAATATGATACCGGCGACAGCCATGTGGGCCACAGCGGGTAGTGGAAACACAATTTGGATGGTACCGGTGAGTGGCGGCGGTGGTGGTGCTGCAACTTCGAATTCAGAGACACAAACACAGAACATGTGGCCTTTTGGTCCTTCTCCATCTCAAAATAGTCAAACTCAAGGGAACAACGCCGGAACTCCGTCTCCGTTACATTTTATGCCGAGGTTTAATCTTCCGGTATCAGGTGGTGGTGGTGGTGGTGGTGTTGAGTTTCAGGGTGGACGTGGTGGTTTACAATTGGGTTCAGTGTATCAACCTTCACAGCATATTGGATTGGCAGTTTCTGATTCAAATTTGGGTATGTTGGCTGCTCTTAATGCTTACACAAGAGCTGCAGCTGGTGCTACTGATTTCAATGTTAATGTTAATTCTGATAATCATCATCACCATCACCATCAACATCAACATCAACATCATTCTATTTCATTGGATTCACAATCTCATTCTCATTCTCATTCTCATTCTCATCCTCAACCTACTGAAAGTGAAGAAGATGCTCCTGATACCTCTCAATGA |
Genomic Sequence | |
Tools Alternative splicing |
TCATTGAGAGGTATCAGGAGCATCTTCTTCACTTTCAGTAGGTTGAGGATGAGAATGAGAATGAGAATGAGAATGAGATTGTGAATCCAATGAAATAGAATGATGTTGATGTTGATGTTGATGGTGATGGTGATGATGATTATCAGAATTAACATTAACATTGAAATCAGTAGCACCAGCTGCAGCTCTTGTGTAAGCATTAAGAGCAGCCAACATACCCAAATTTGAATCAGAAACTGCCAATCCAATATGCTGTGAAGGTTGATACACTGAACCCAATTGTAAACCACCACGTCCACCCTGAAACTCAACACCACCACCACCACCACCACCTGATACCGGAAGATTAAACCTCGGCATAAAATGTAACGGAGACGGAGTTCCGGCGTTGTTCCCTTGAGTTTGACTATTTTGAGATGGAGAAGGACCAAAAGGCCACATGTTCTGTGTTTGTGTCTCTGAATTCGAAGTTGCAGCACCACCACCGCCGCCACTCACCGGTACCATCCAAATTGTGTTTCCACTACCCGCTGTGGCCCACATGGCTGTCGCCGGTATCATATTCGACGGTCGAAGAAGTCCAGAAATTGAACTATTAGAAGAAGATGAAGAAGAAGCTCCACTACCACCACCACCGCCGCCGCCGCCTCCACCTTCACCTTCACCCATAGTATCTTGTTGTTGATGATTTGTTTTGAAAGCTTTTGGAGAAGAAGAAGAACCATCACCACCACTTTCGTTGTTGTTATTATCGTCTTTGAAAAGATCTTCTCTATAACGTTTCCTCATGTAATTCTCGTTTGGATTTAAAGCTTCACCGATTTGATCAGCACTCATCAGTTGTTGGTGGTGTTGATGAAACCCTAGAAGAGGCGCGTGTTGGTACGCGGCTTCCTCGTAAGGATGACGAGTCAGTGCAAGCGCGCCGTGAAAACTGTGAGGAGCCGATTTCGACGGCGGAGCCGACAGCGTGGAGCCACTGCTTCTGAGTGAGACGTTCAGAGTGGAGAAATTAGCTGGGATCGTTCCGGTGCCAGTGGCGGCGATGATCGCTGGTTCTGCTTGCTGGAGAAGCCACTCGATTGTTTCGCCGTCGGATTTGTGGCCTAATTCTCTGGTCAACTGAAAAACCCTGGCAGCACATGTCGCCGGCATTCGAATTCTACGGCCGCGGCCGTCGACTTTGGTGTGTCTGTCTTTGGTGGATCGTTTAGGAGGATTGGCGACGGTGGTGACGGCGGGAGAGGAGGAGGATAATTGGTTATTTGTGTTATTGAGGAGTGGAGGTTCAGATCTGGTGGCGATGGCGAGAGAAGCGTCAATGGCAGAAGATGAAGAATTGGAGGAAGAAGAAGAAGAAGAGTTTGAAGAAGGTTGTTGGATGGAGATGGAGCCCATAATGAAAGGGGGTGGTCTTCCATCAAAAGGGACCACAAGGTGTTGTTGATGAGAATGAGAATGAGAATGAGAATGAGAATTTGAAGGAGAAGAAGATGATTCTTGTTGTTGTTGTTGGTGGGTGCCTCTCTTCTGCTTGTTGTTTTGCAAATCTGATAGTTCCAT |
Protein Sequence | |
Amino acid Length | 520 aa |
Tools Domain Analysis Disorder Structure MELSDLQNNKQKRGTHQQQQQESSSSPSNSHSHSHSHSHQQHLVVPFDGRPPPFIMGSISIQQPSSNSSSSSSSNSSSSAIDASLAIATRSEPPLLNNTNNQLSSSSPAVTTVANPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHSFHGALALTRHPYEEAAYQHAPLLGFHQHHQQLMSADQIGEALNPNENYMRKRYREDLFKDDNNNNESGGDGSSSSPKAFKTNHQQQDTMGEGEGGGGGGGGGGSGASSSSSSNSSISGLLRPSNMIPATAMWATAGSGNTIWMVPVSGGGGGAATSNSETQTQNMWPFGPSPSQNSQTQGNNAGTPSPLHFMPRFNLPVSGGGGGGGVEFQGGRGGLQLGSVYQPSQHIGLAVSDSNLGMLAALNAYTRAAAGATDFNVNVNSDNHHHHHHQHQHQHHSISLDSQSHSHSHSHSHPQPTESEEDAPDTSQ | |
Promoter Sequence (1.5 kb) | |
Tools Motif Search | TTGTGGGGAAGCCTACTTGCTTACTTCAACCTTTTTTTTTATATATATAAAAAAATATAATTTATATTTGAATTTCTGGGGTATATCATATCATAGATGATTCATGGGTGTGTTGTTTTTCAACACTAACTCCAACGATAGCTCTAACTCTAACTCAAATTCAGTCATGCCAATTAGACAGAGAAAACAAAGTGGGGTGGGGTGGGGGCGCGGGTTAGAGAGAGAGAGAGAGACAGAAAGGCACAGACACACACACAAAGAACAAAGATAAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTTTAAAATTTGAAAGGGTGTGTTGGAATGGAGTGGACCAAAATGAGTGAGAGTTAGTGGGGTTGTGATTGACTGTTGTCTTGCTTGCTCGGTTATGTGAGAATGAGTGGGGACCGTAGTTAGTACTGTAGGAGTATTAGTAAGTGAAAAAAACGTAACAGAAGACCACTCGTGGGGTCTCGTAAAAGGAATTCCAAATATTGCCCTTTCTTACTCTCTCTCTCTCTCTCTGTGATTCAAAGTCAAGACTCCAATTTCCTCTCTCCTCCAACTGGCCAACACAAACTAATATACTATAATTTCAAATCTCTTCTTTCATTACAAAATTATAATTATGAGAGATTCAGATTGATTTTATTCAGTGTTAATATAGAGTTTGATAGAAATTATAATGATTGGGCAGTGGGTGGGTGGGTGTTTAAAGTGTATAAATAAACTTCACATTCACATTCACATTCACAATATTGAATTCAATTCCACAGATGAGCAACAGATAAAGGCATCTAATGCAGTATAGCAAGACAGCTCATCCCAACCCAATCCACATTTCTTTTTTCTTTTTTCTTTTTTCTTTTTCTCATGGTCAAATTTCCTTGCCCACTCTACCTTTTCGTTAGTGGAGGATCCACAAACACATAATTCTCCTTGCTCCATGCATATTTCAATTTCAAATCTATTTATTCTATACATCTAATGCAACAACAGAATCACTCGTATATAAAACTAATGGAATTTACGTGACTTTCATCCTACAAAAAGACTGTAAAATTAAAGTGGGTCATGGAAAAATATGTTTCTAATACTTCTAAAATAATTATTTACTGTATAGAAGATTATCAAAAATATCTTTCAAAAAATATTTAATATCTCTATGTATTCATATATTATATATATAAGAAGAAGAAAAATAAATAAATAGTTGTAATTCAAATACTTTTTTAATGGTTTATATGAGTCTCCTCCTCTTCAATTAAATCATTTGTTCAATTCATGTATACAAATATTTTACAAATATTAAACCATGTGCATACCAATTATATGAGTTGCATCAAATGGTGTTTTGTTGAATTCATGTATACCAATATTTCACACTATCAATGCATACCAATTAATATAATTTTGTATTTTGTATTATAACTTGTATTCATATACAAAAGATTAATAGTAGTTCTGATGAAAATTATAACATGATGTATGGCAAG |
Features | |
Domains (Pfam) | |
Motifs (PLACE) | Show Details |
Predicted Localization (Loctree) | nucleus |
Gene Ontology | |
Orthology | |
PlantTFDB | |
TAIR |